Jensun Ravichandran
d2856383e2
[BUGFIX] examples/gng_iris.py
works again
2021-06-14 20:29:31 +02:00
Jensun Ravichandran
4eafe88dc4
[BUGFIX] examples/ksom_colors.py
works again
2021-06-14 20:23:07 +02:00
Jensun Ravichandran
3afced8662
[BUGFIX] examples/glvq_spiral.py
works again
2021-06-14 20:19:08 +02:00
Jensun Ravichandran
68034d56f6
[BUGFIX] examples/glvq_iris.py
works again
2021-06-14 20:13:25 +02:00
Alexander Engelsberger
c87ed5ba8b
[FEATURE] Add PLVQ model
2021-06-12 13:02:26 +02:00
Jensun Ravichandran
ea33196a50
Update SOM example
2021-06-11 11:30:27 +02:00
Jensun Ravichandran
57f8bec270
Update SOM
2021-06-09 18:21:12 +02:00
Jensun Ravichandran
c7b5c88776
[WIP] Add SOM
2021-06-07 18:44:15 +02:00
Jensun Ravichandran
b031382072
Update NG
2021-06-07 18:35:08 +02:00
Jensun Ravichandran
b82bb54dbe
Add LGMLVQ example
2021-06-04 22:58:54 +02:00
Jensun Ravichandran
5d2a8226ce
Update example scripts
2021-06-04 22:21:28 +02:00
Jensun Ravichandran
20471bfb1c
[FEATURE] Update pruning callback to re-add pruned prototypes
2021-06-04 15:56:46 +02:00
Jensun Ravichandran
42d974e08c
No implicit learning rate scheduling
2021-06-04 15:55:06 +02:00
Jensun Ravichandran
b0df61d1c3
[BUGFIX] Fix examples/ng_iris.py
2021-06-03 16:34:48 +02:00
Alexander Engelsberger
47db1965ee
[BUGFIX] GNG Example
2021-06-03 15:42:54 +02:00
Alexander Engelsberger
5918f1cc21
[BUGFIX] CLI example documentation improved
2021-06-03 13:47:20 +02:00
Alexander Engelsberger
3b02d99ebe
[BUGFIX] Early stopping example works now
2021-06-03 13:38:16 +02:00
Jensun Ravichandran
64250d0938
[BUG] CLI example crashes
...
Running examples/cli/gmlvq.py crashes with:
```
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
~/miniconda3/envs/py38/lib/python3.8/site-packages/pytorch_lightning/utilities/parsing.py in __getattr__(self, key)
249 try:
--> 250 return self[key]
251 except KeyError as exp:
KeyError: 'distribution'
The above exception was the direct cause of the following exception:
AttributeError Traceback (most recent call last)
~/work/repos/prototorch_models/examples/cli/gmlvq.py in <module>
10
11
---> 12 cli = LightningCLI(GMLVQMNIST)
~/miniconda3/envs/py38/lib/python3.8/site-packages/pytorch_lightning/utilities/cli.py in __init__(self, model_class, datamodule_class, save_config_callback, trainer_class, trainer_defaults, seed_everything_default, description, env_prefix, env_parse, parser_kwargs, subclass_mode_model, subclass_mode_data)
168 seed_everything(self.config['seed_everything'])
169 self.before_instantiate_classes()
--> 170 self.instantiate_classes()
171 self.prepare_fit_kwargs()
172 self.before_fit()
~/miniconda3/envs/py38/lib/python3.8/site-packages/pytorch_lightning/utilities/cli.py in instantiate_classes(self)
211 self.config_init = self.parser.instantiate_subclasses(self.config)
212 self.instantiate_datamodule()
--> 213 self.instantiate_model()
214 self.instantiate_trainer()
215
~/miniconda3/envs/py38/lib/python3.8/site-packages/pytorch_lightning/utilities/cli.py in instantiate_model(self)
228 self.model = self.config_init['model']
229 else:
--> 230 self.model = self.model_class(**self.config_init.get('model', {}))
231
232 def instantiate_trainer(self) -> None:
~/work/repos/prototorch_models/prototorch/models/glvq.py in __init__(self, hparams, **kwargs)
307 def __init__(self, hparams, **kwargs):
308 distance_fn = kwargs.pop("distance_fn", omega_distance)
--> 309 super().__init__(hparams, distance_fn=distance_fn, **kwargs)
310 omega = torch.randn(self.hparams.input_dim,
311 self.hparams.latent_dim,
~/work/repos/prototorch_models/prototorch/models/glvq.py in __init__(self, hparams, **kwargs)
39 # Layers
40 self.proto_layer = LabeledComponents(
---> 41 distribution=self.hparams.distribution,
42 initializer=self.prototype_initializer(**kwargs))
43
~/miniconda3/envs/py38/lib/python3.8/site-packages/pytorch_lightning/utilities/parsing.py in __getattr__(self, key)
250 return self[key]
251 except KeyError as exp:
--> 252 raise AttributeError(f'Missing attribute "{key}"') from exp
253
254 def __setattr__(self, key, val):
AttributeError: Missing attribute "distribution"
```
2021-06-02 13:02:40 +02:00
Jensun Ravichandran
ef6bcc1079
[BUG] Early stopping does not seem to work
...
The early stopping callback does not work as expected, and crashes at the end of
max_epochs with:
```
~/miniconda3/envs/py38/lib/python3.8/site-packages/pytorch_lightning/trainer/callback_hook.py in on_train_end(self)
155 """Called when the train ends."""
156 for callback in self.callbacks:
--> 157 callback.on_train_end(self, self.lightning_module)
158
159 def on_pretrain_routine_start(self) -> None:
~/work/repos/prototorch_models/prototorch/models/callbacks.py in on_train_end(self, trainer, pl_module)
18 def on_train_end(self, trainer, pl_module):
19 # instead, do it at the end of training loop
---> 20 self._run_early_stopping_check(trainer, pl_module)
21
22
TypeError: _run_early_stopping_check() takes 2 positional arguments but 3 were given
```
2021-06-02 12:44:34 +02:00
Jensun Ravichandran
bdacc83185
[REFACTOR] Update examples/dynamic_pruning.py
2021-06-02 03:53:21 +02:00
Jensun Ravichandran
a3f5d7d113
Update docstring
2021-06-02 02:40:29 +02:00
Jensun Ravichandran
b2009bb563
[FEATURE] Add example to showcase dynamic pruning of prototypes
2021-06-02 02:36:37 +02:00
Jensun Ravichandran
398431e7ea
Remove examples/dynamic_components.py
2021-06-02 02:35:45 +02:00
Jensun Ravichandran
d46fe4a393
[WIP] Update CBC example
2021-06-02 00:45:33 +02:00
Jensun Ravichandran
9eb6476078
[BUG] Training unstable in examples/gng_iris.py
2021-06-02 00:21:42 +02:00
Jensun Ravichandran
7e241ff7d8
[WIP] Update examples/liramlvq_tecator.py
2021-06-02 00:02:31 +02:00
Jensun Ravichandran
930f84d3c7
Remove examples/gmlvq_iris.py
2021-06-01 23:40:15 +02:00
Alexander Engelsberger
9c1a41997b
[FEATURE] Add Growing Neural Gas
2021-06-01 17:19:43 +02:00
Jensun Ravichandran
1636c84778
Rename rslvq example
2021-05-31 17:56:45 +02:00
Jensun Ravichandran
27eccf44d4
Use LambdaLayer from ProtoTorch
2021-05-31 16:53:04 +02:00
Alexander Engelsberger
8f4d66edf1
[Bugfix] Fix classcount in LIRAMLVQ example
2021-05-31 11:48:23 +02:00
Alexander Engelsberger
2a218c0ede
Add example for dynamic components in callbacks
2021-05-31 11:39:24 +02:00
Alexander Engelsberger
0ac4ced85d
[refactor] Use functional variant of accuracy
...
Prevents Accuracy in `__repr__` of the models.
2021-05-31 11:12:27 +02:00
Jensun Ravichandran
e9d2075fed
Sort imports in example scripts
2021-05-31 00:52:16 +02:00
Jensun Ravichandran
7b7bc3693d
Merge branch 'dev' of github.com:si-cim/prototorch_models into dev
2021-05-31 00:32:49 +02:00
Jensun Ravichandran
cd73f6c427
Add examples/dynamic_components.py
2021-05-31 00:32:27 +02:00
Alexander Engelsberger
e3392ee952
[refactor] DRY Probabilistic models
2021-05-28 17:13:06 +02:00
Alexander Engelsberger
dade502686
Add MNIST datamodule and training mixin factory.
2021-05-28 16:33:31 +02:00
Jensun Ravichandran
cc49f26b77
Remove normalization transform from cli example
2021-05-25 21:13:37 +02:00
Jensun Ravichandran
db965541fd
Update example
2021-05-25 20:57:54 +02:00
Alexander Engelsberger
32d6f95db0
Add RSLVQ and LikelihoodLVQ
2021-05-25 20:26:15 +02:00
Alexander Engelsberger
72e064338c
Use 'num_' in all variable names
2021-05-25 15:41:10 +02:00
Alexander Engelsberger
e7e6bf9173
Fix failing example
2021-05-21 18:54:47 +02:00
Alexander Engelsberger
2aa631f4e6
Improve example test script (with failing example)
2021-05-21 18:48:37 +02:00
Alexander Engelsberger
5b12629bd9
All examples use argparse
2021-05-21 17:55:55 +02:00
Alexander Engelsberger
b60db3174a
LightningCLI Example.
2021-05-21 17:13:15 +02:00
Jensun Ravichandran
88a34a06ef
[WIP] Update CBC implementation to use SiameseGLVQ
2021-05-20 17:36:00 +02:00
Jensun Ravichandran
49f9a12b5f
Update mnist example
2021-05-20 17:35:07 +02:00
Jensun Ravichandran
16dc3cf4eb
Update image visualization
2021-05-20 16:07:16 +02:00
Jensun Ravichandran
df061cc2ff
Refactor code
2021-05-20 14:40:02 +02:00