"""Neural Gas example using the Iris dataset.""" import argparse import warnings import prototorch as pt import pytorch_lightning as pl import torch from lightning_fabric.utilities.seed import seed_everything from prototorch.models import NeuralGas, VisNG2D from pytorch_lightning.utilities.warnings import PossibleUserWarning from sklearn.datasets import load_iris from sklearn.preprocessing import StandardScaler from torch.optim.lr_scheduler import ExponentialLR from torch.utils.data import DataLoader warnings.filterwarnings("ignore", category=PossibleUserWarning) warnings.filterwarnings("ignore", category=UserWarning) if __name__ == "__main__": # Reproducibility seed_everything(seed=4) # Command-line arguments parser = argparse.ArgumentParser() parser.add_argument("--gpus", type=int, default=0) parser.add_argument("--fast_dev_run", type=bool, default=False) args = parser.parse_args() # Prepare and pre-process the dataset x_train, y_train = load_iris(return_X_y=True) x_train = x_train[:, 0:3:2] scaler = StandardScaler() scaler.fit(x_train) x_train = scaler.transform(x_train) train_ds = pt.datasets.NumpyDataset(x_train, y_train) # Dataloaders train_loader = DataLoader(train_ds, batch_size=150) # Hyperparameters hparams = dict( num_prototypes=30, input_dim=2, lr=0.03, ) # Initialize the model model = NeuralGas( hparams, prototypes_initializer=pt.core.ZCI(2), lr_scheduler=ExponentialLR, lr_scheduler_kwargs=dict(gamma=0.99, verbose=False), ) # Compute intermediate input and output sizes model.example_input_array = torch.zeros(4, 2) # Callbacks vis = VisNG2D(data=train_ds) # Setup trainer trainer = pl.Trainer( accelerator="cuda" if args.gpus else "cpu", devices=args.gpus if args.gpus else "auto", fast_dev_run=args.fast_dev_run, callbacks=[ vis, ], max_epochs=1000, log_every_n_steps=1, detect_anomaly=True, ) # Training loop trainer.fit(model, train_loader)