Added Vis for GMLVQ with more then 2 dims using PCA (#11)

* Added Vis for GMLVQ with more then 2 dims using PCA

* Added initialization possibility to GMlVQ with PCA and one example with omega init + PCA vis of 3 dims

* test(githooks): Add githooks for automatic commit checks

Co-authored-by: staps@hs-mittweida.de <staps@hs-mittweida.de>
Co-authored-by: Alexander Engelsberger <alexanderengelsberger@gmail.com>
This commit is contained in:
danielstaps
2021-06-18 11:28:11 +00:00
committed by GitHub
parent 8956ee75ad
commit 0a2da9ae50
4 changed files with 143 additions and 6 deletions

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examples/gmlvq_iris.py Normal file
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"""GLVQ example using the Iris dataset."""
import argparse
import prototorch as pt
import pytorch_lightning as pl
import torch
from torch.optim.lr_scheduler import ExponentialLR
if __name__ == "__main__":
# Command-line arguments
parser = argparse.ArgumentParser()
parser = pl.Trainer.add_argparse_args(parser)
args = parser.parse_args()
# Dataset
train_ds = pt.datasets.Iris()
# Dataloaders
train_loader = torch.utils.data.DataLoader(train_ds, batch_size=64)
# Hyperparameters
hparams = dict(
input_dim=4,
latent_dim=3,
distribution={
"num_classes": 3,
"prototypes_per_class": 2
},
proto_lr=0.0005,
bb_lr=0.0005,
)
# Initialize the model
model = pt.models.GMLVQ(
hparams,
optimizer=torch.optim.Adam,
prototype_initializer=pt.components.SSI(train_ds),
lr_scheduler=ExponentialLR,
lr_scheduler_kwargs=dict(gamma=0.99, verbose=False),
omega_initializer=pt.components.PCA(train_ds.data)
)
# Compute intermediate input and output sizes
#model.example_input_array = torch.zeros(4, 2)
# Callbacks
vis = pt.models.VisGMLVQ2D(data=train_ds, border=0.1)
# Setup trainer
trainer = pl.Trainer.from_argparse_args(
args,
callbacks=[vis],
weights_summary="full",
accelerator="ddp",
)
# Training loop
trainer.fit(model, train_loader)