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191 Commits

Author SHA1 Message Date
Alexander Engelsberger
0055e15bc1 [DOC] Fix iris data dimension 2021-05-18 18:57:03 +02:00
Alexander Engelsberger
b2e1df7308 Improve dataset documentation. 2021-05-18 18:54:43 +02:00
Jensun Ravichandran
b935e9caf3 Update _get_dp_dm 2021-05-18 13:09:11 +02:00
Jensun Ravichandran
503ef0e05f Cleanup components 2021-05-17 16:58:57 +02:00
Jensun Ravichandran
dc6248413c Apply transformations in component initializers 2021-05-17 16:58:22 +02:00
Jensun Ravichandran
e73b70ceb7 Minor aesthetic change 2021-05-17 16:57:41 +02:00
Jensun Ravichandran
639198e774 Update Iris dataset 2021-05-17 16:57:13 +02:00
Alexander Engelsberger
768d969f89 Device agnostic initialization of components. 2021-05-13 15:21:04 +02:00
Jensun Ravichandran
6c14170de6 [BUGFIX] Fix typo 2021-05-12 16:31:22 +02:00
Jensun Ravichandran
36a330aa66 Update component initializers 2021-05-12 16:28:55 +02:00
Jensun Ravichandran
acd4ac6a86 Flatten tensors before computing distances 2021-05-12 16:28:34 +02:00
Danny
caae95d01d Removed wrong parameter. 2021-05-12 16:00:01 +02:00
Alexander Engelsberger
088429a16a Bump version: 0.4.3 → 0.4.4 2021-05-11 17:17:49 +02:00
Jensun Ravichandran
b6145223c8 [HOTFIX] Add missing iris.py and fix knnc bug 2021-05-11 17:20:48 +02:00
Alexander Engelsberger
09256956f3 Bump version: 0.4.2 → 0.4.3 2021-05-11 17:04:08 +02:00
Jensun Ravichandran
0ca90fdcee Merge branch 'dev' of github.com:si-cim/prototorch into dev 2021-05-11 17:07:04 +02:00
Jensun Ravichandran
be21412f8a Add thin wrapper for the Iris dataset 2021-05-11 17:06:41 +02:00
Jensun Ravichandran
ae6bc47f87 [BUGFIX] Fix knnc 2021-05-11 17:06:27 +02:00
Jensun Ravichandran
7bb93f027a Support for unequal prototype distributions 2021-05-11 16:11:11 +02:00
Alexander Engelsberger
bc20acd63b Bump version: 0.4.1 → 0.4.2 2021-05-11 16:08:37 +02:00
Alexander Engelsberger
a864cf5d4d Bump version: 0.4.0 → 0.4.1 2021-05-11 13:37:54 +02:00
Alexander Engelsberger
c1c21e92df Add LVQ 1 and LVQ 2.1 loss functions. 2021-05-11 13:25:10 +02:00
Alexander Engelsberger
a9eef8ae6d Bump version: 0.3.1 → 0.4.0 2021-05-10 15:10:07 +02:00
Alexander Engelsberger
ac3091d8da Update Bumpversion config 2021-05-10 15:09:38 +02:00
Jensun Ravichandran
ce3991de94 Accept torch datasets to initialize components 2021-05-07 15:19:22 +02:00
Jensun Ravichandran
47b4b9bcb1 Expose prototorch.datasets 2021-05-07 15:18:33 +02:00
Alexander Engelsberger
19475d7e2b Update Tecator dataset storage id. 2021-05-06 18:42:36 +02:00
Jensun Ravichandran
b06ded683d Update functions/activations.py 2021-05-04 20:55:49 +02:00
Jensun Ravichandran
466e9bde6b Refactor functions/losses.py 2021-05-04 20:36:48 +02:00
Jensun Ravichandran
9a7d3192c0 [BUG] GLVQ training is unstable 
GLVQ training is unstable when prototypes are initialized exactly to datapoints
without small shifts. Perhaps because of zero distances?
 2021-04-29 19:25:28 +02:00
Jensun Ravichandran
e686adbea1 Add spiral dataset 2021-04-29 19:15:35 +02:00
Jensun Ravichandran
b7d53aa5f1 Update initializers 2021-04-29 19:15:27 +02:00
Jensun Ravichandran
9b663477fd Update components 2021-04-29 18:06:26 +02:00
Alexander Engelsberger
40751aa50a Create Component and initializer classes. 2021-04-26 20:49:50 +02:00
Alexander Engelsberger
7c30ffe2c7 Automatic Formatting. 2021-04-23 17:25:23 +02:00
Alexander Engelsberger
e1d56595c1 Add NumpyDataset. 2021-04-23 17:24:59 +02:00
Alexander Engelsberger
4540c8848e Add neural gas energy function as loss. 2021-04-23 17:24:59 +02:00
Alexander Engelsberger
c88f288d12 Copy utilities for visualization from Protoflow. 2021-04-23 17:24:59 +02:00
Jensun Ravichandran
e2918dffed Add euclidean_distance_v2 2021-04-22 16:55:50 +02:00
Jensun Ravichandran
7d9dfc27ee Add similarities file 2021-04-22 13:12:19 +02:00
Alexander Engelsberger
ae75b9ebf7 Bump version: 0.2.0 → 0.3.0-dev0 2021-04-21 14:57:45 +02:00
Alexander Engelsberger
34973808b8 Improve documentation. 2021-04-21 14:55:54 +02:00
Alexander Engelsberger
c42df6e203 Merge version 0.2.0 into feature/plugin-architecture. 2021-04-19 16:44:26 +02:00
Jensun Ravichandran
101b50f4e6 Update prototypes.py 
Changes:
1. Change single-quotes to double-quotes.
 2021-04-15 12:35:06 +02:00
Jensun Ravichandran
db842b79bb Bump version: 0.1.1-rc0 → 0.2.0 2021-04-14 19:21:14 +02:00
Jensun Ravichandran
98a8fc52fa Add docs 2021-04-14 19:20:08 +02:00
Jensun Ravichandran
6796ec494f
Merge pull request #1 from ChristophRaab/dev 
gtlvq
 2021-04-14 16:18:30 +02:00
Alexander Engelsberger
cd9303267b Use git version. 2021-04-14 13:48:00 +02:00
Alexander Engelsberger
599dfc3fda Fix issue with plugin subpackage import. 2021-04-13 22:55:49 +02:00
Alexander Engelsberger
5b2ab34232 Add plugin loader. 2021-04-13 12:36:22 +02:00
Jensun Ravichandran
bc7df1059f Add utils folder with color utils 2021-02-10 17:03:12 +01:00
Christoph
e39f307194 Another Codacy bug fix 2021-01-14 11:27:20 +01:00
Christoph
e2867f696e Anoter Codacy bug fix 2021-01-14 11:18:25 +01:00
Christoph
30dc0ea8b1 Codacy Bug Report fixes 2021-01-14 10:04:43 +01:00
Christoph
895281aabd gtlvq 2021-01-12 18:11:46 +01:00
Jensun Ravichandran
58efa5a4cf Fix things codacy complains about 2020-09-24 11:53:35 +02:00
Jensun Ravichandran
d5ab9c3771 Fix divide-by-zero in example 2020-09-23 15:29:26 +02:00
blackfly
8a4a596035 Make prototype_labels non-trainable Parameters 2020-04-27 13:39:27 +02:00
blackfly
0cfbc0473b Bump version: 0.1.1-dev0 → 0.1.1-rc0 2020-04-27 12:56:42 +02:00
blackfly
d17b9a3346 Modify stratified_min function 2020-04-27 12:48:12 +02:00
blackfly
532f63b1de Add one-hot support in functions/initializers.py 2020-04-27 12:47:44 +02:00
blackfly
c11a3860df Refactor functions/losses.py 2020-04-27 12:47:15 +02:00
blackfly
dab91e471a Add minor cosmetic changes 2020-04-27 12:45:42 +02:00
blackfly
a167565857 Update Prototypes1D 2020-04-27 12:44:19 +02:00
blackfly
88cbe0a126 Add alias for squared_euclidean_distance 2020-04-14 19:53:26 +02:00
blackfly
a3548e0ddd Add stratified_min competition function 2020-04-14 19:52:59 +02:00
blackfly
3cfbc49254 Fix generator bug in stratified_random initializer 2020-04-14 19:51:54 +02:00
blackfly
2b82830590 Add 'datasets' to main package __init__.py 2020-04-14 19:51:14 +02:00
blackfly
553b1e1a65 Refactor datasets and use float32 instead of float64 in Tecator 2020-04-14 19:49:59 +02:00
blackfly
a9d2855323 Refactor prototypes module and begin documentation 2020-04-14 19:48:46 +02:00
blackfly
a22c752342 Add prototorch/datasets 2020-04-14 19:47:34 +02:00
blackfly
4158586cb9 More cosmetic changes 2020-04-11 18:12:37 +02:00
blackfly
f80d9648c3 Minor cosmetic changes 2020-04-11 17:35:32 +02:00
blackfly
e54bf07030 Populate init files 2020-04-11 17:35:00 +02:00
blackfly
8c629c0cb1 Fix a bunch of codacy code-style issues 2020-04-11 15:47:26 +02:00
blackfly
8f3a43f62a Remove assert statements following codacy security recommendation 
"Use of assert detected. The enclosed code will be removed when compiling to
optimised byte code."
 2020-04-11 15:45:29 +02:00
blackfly
955661af95 Remove utils import from prototorch/__init__.py 2020-04-11 15:12:53 +02:00
blackfly
c54d14c55e Remove datasets import from prototorch/__init__.py 2020-04-11 14:59:11 +02:00
blackfly
1ec7bd261b Add small API changes and more test cases 2020-04-11 14:28:22 +02:00
blackfly
f640a22cf2 Rename input to x in activation functions 2020-04-11 14:25:35 +02:00
blackfly
438a5b9360 Bump version: 0.1.0-rc0 → 0.1.1-dev0 2020-04-08 23:00:34 +02:00
blackfly
b19cbcb76a Fix zero-distance bug in glvq_loss 2020-04-08 22:46:08 +02:00
blackfly
7d5ab81dbf Clean up prototorch/functions/distances.py 2020-04-08 22:44:02 +02:00
blackfly
bde408a80e Prepare activation and competition functions for TorchScript 2020-04-08 22:42:56 +02:00
blackfly
3757c937b3 Bump version: 0.1.0-dev0 → 0.1.0-rc0 2020-04-06 21:49:52 +02:00
blackfly
4ec0bb5e60 Bump version: 0.0.0-dev1 → 0.1.0-dev0 2020-04-06 18:22:15 +02:00
blackfly
398d863232 Add prototype and loss modules 2020-04-06 16:36:28 +02:00
blackfly
33e8f1297f Add basic prototorch functions needed for GLVQ 2020-04-06 16:33:51 +02:00
blackfly
a113b45a73 Add distance functions 2020-04-05 13:41:17 +02:00
blackfly
93e70b6c82 Add prototorch/functions/__init__.py 2020-04-05 13:39:16 +02:00
blackfly
5d7188abf1 Add prototorch/__init__.py 2020-04-05 13:38:29 +02:00